| Basic information |
| Official Symbol | ZSWIM1 |
| Description | zinc finger, SWIM-type containing 1 |
| Other Aliases | C20orf162 |
| Other Description | zinc finger SWIM domain-containing protein 1; zinc finger, SWIM domain containing 1 |
| Mutation type | premature termination 26:P->TAG |
| Location | Scaffold000602_1:62796 64238 + |
| Wiki | Wikipedia GeneCard |
| Sequence |
| ZSWIM1 |
CTCAGGAGACTGAAAGCCTCTCAGACAGCAGCCCTGCAGAGAAAGTATTT TGACTTTGGCATTTAGGTCTCTCCCATGGCCCTGACTGTGCTGAATGGGC TCCTGATTAAGGACTCAGGCCCACCTATGCTGCTGCACCAGCTTAGCAAG AGTCCCCAGTTAGATACCTTCAGCTACCAGAGCTGCTTTATGCAGGAAGT CTTTGCCCATTTCCCTGAGATCTTATTTATCCACCGGACCTATAACCCCA GGGGCAAGGTGCTATATACCTTCCTGGTGGATGGACCTCGGGTGCAGCTG GAAGGTCCTTTTGCCCGGGCAGTCTACTTCGCCATCCCTGCCAAGGAAGA TGCTGAAGGCCTGGCCCAGATGTTCCAAGTGTTCAAGAAGTTTAACCCAG TGTGGGAAAGAATCTGTACAATCCTAGTGGACCCCCACTTCCTCCCACTC CCCATCTTAGCGATGGAGTTCCCTGCAGCTGAGGTTCTATTTTCAGCTTT CCACATCTGTAAGTTCCTCCAGGGCAAGTTCTATCAGCTGTCCCTCGAAC AGCCTGTGGAAAGGGTGCTCCTGACCTCCCTGCAGAACACGATGTGCTCA GCCACCGCAGGCAACCTGCGGAAGCTGTACACGCTCCTGAGCAACTGCAT CCCCCCGACACAGCTGCCTCAACTCCATTCCCACTGGTTGCTCAACGACC GCATCTGGCTGGCGCACCGCTGGAGAAGCCGAGCTGAGAGCACTCGCTAT TTCCAGAACCTCGAGGTCACCACCCGCATCCTCAGCCAGTTCTTTGGTAC CACCCCATCTGAGAAACAAGGTGTGGCCTCTCTGTTCCAGTACATGCAAC AGAACTCTGGAGACAAGGCAAGTTTCAACCCGGGCTTGAGTCACCAGAAC GATCACGACCCCTCGGACCCCAGTCCCGAAACCCCCAAAGTGGAGCAGTT GGTAGAAGCCCGTATCCAGCACTCCCTCAATGCCATTTGCACAGGGCCGG CAGCCCAGCTCTGCCTCGGAGAGCTTGCAGTGGTCCAGAAATCCATGCAC CTCATTGGCTCCGGCTCAGAAAAGATGAACATCCAGATCCTGGAGGATAC CCACAAAGTGCAGCCCCAGTCCCCCGCCAGCTGCAGCTGCTACTTCAACC AGGCCTTCCACCTGCCCTGCCGCCACATCCTAGCCATGCTCAGCGCCCGC CACCAGGTGCTCCAGCCCGACATGCTGCCAGCTCAATGGACAGCAGGCTG TGCCACCAGTCTAGATGGCATCCTGGGCAGCAAGTGGAGTGAGACCCTGG ATAAGCACCTGGCAGTGACTCTCCTTACTGAGAAGGTGAGTCAGCTTCTG CAGCACTGCAGCAAGGAAGAGTTTGAGCGGAGGTATAGCATCCTGAGGAT ACTGGCTGACAGCTGGATCGGCCCTTATGAGCAGGTCCAGCTC |
| Alignment |
| Align specie | Pep length | Pep align begin | Pep align end | Mutaion type and postion |
| Human | 485 | 2 | 485 | Premature termination 26:P->TAG |
Instructions: *** -> premature termination codon; # -> frame shift Alignment: Human pep sequence ---> |||||||||||||||||||||| Treeshrew pep sequence ---> Treeshrew cds sequence ---> LeuGluArgLeuLysAlaProTrpSerAlaAlaLeuGlnArgLysTyrPheAspLeuGlyIl ||| |||||||||||| ||||||||||||||||||||||||||| ||||| LeuArgArgLeuLysAlaSerGlnThrAlaAlaLeuGlnArgLysTyrPheAspPheGlyIl CTCAGGAGACTGAAAGCCTCTCAGACAGCAGCCCTGCAGAGAAAGTATTTTGACTTTGGCAT eTrpThrAlaProIleSerProMetAlaLeuThrMetLeuAsnGlyLeuLeuIleLysAspS | |||||||||||||||||| ||||||||||||||||||||||||| e---------***ValSerProMetAlaLeuThrValLeuAsnGlyLeuLeuIleLysAspS T---------TAGGTCTCTCCCATGGCCCTGACTGTGCTGAATGGGCTCCTGATTAAGGACT erSerProProMetLeuLeuHisGlnValAsnLysThrAlaGlnLeuAspThrPheAsnTyr || ||||||||||||||||||||| ||| ||||||||||||||| ||| erGlyProProMetLeuLeuHisGlnLeuSerLysSerProGlnLeuAspThrPheSerTyr CAGGCCCACCTATGCTGCTGCACCAGCTTAGCAAGAGTCCCCAGTTAGATACCTTCAGCTAC GlnSerCysPheMetGlnSerValPheAspHisPheProGluIleLeuPheIleHisArgTh |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| GlnSerCysPheMetGlnGluValPheAlaHisPheProGluIleLeuPheIleHisArgTh CAGAGCTGCTTTATGCAGGAAGTCTTTGCCCATTTCCCTGAGATCTTATTTATCCACCGGAC rTyrAsnProArgGlyLysValLeuTyrThrPheLeuValAspGlyProArgValGlnLeuG |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| rTyrAsnProArgGlyLysValLeuTyrThrPheLeuValAspGlyProArgValGlnLeuG CTATAACCCCAGGGGCAAGGTGCTATATACCTTCCTGGTGGATGGACCTCGGGTGCAGCTGG luGlyHisLeuAlaArgAlaValTyrPheAlaIleProAlaLysGluAspThrGluGlyLeu ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| luGlyProPheAlaArgAlaValTyrPheAlaIleProAlaLysGluAspAlaGluGlyLeu AAGGTCCTTTTGCCCGGGCAGTCTACTTCGCCATCCCTGCCAAGGAAGATGCTGAAGGCCTG AlaGlnMetPheGlnValPheLysLysPheAsnProAlaTrpGluArgValCysThrIleLe |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| AlaGlnMetPheGlnValPheLysLysPheAsnProValTrpGluArgIleCysThrIleLe GCCCAGATGTTCCAAGTGTTCAAGAAGTTTAACCCAGTGTGGGAAAGAATCTGTACAATCCT uValAspProHisPheLeuProLeuProIleLeuAlaMetGluPheProThrAlaGluValL ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| uValAspProHisPheLeuProLeuProIleLeuAlaMetGluPheProAlaAlaGluValL AGTGGACCCCCACTTCCTCCCACTCCCCATCTTAGCGATGGAGTTCCCTGCAGCTGAGGTTC euLeuSerAlaPheHisIleCysLysPheLeuGlnAlaLysPheTyrGlnLeuSerLeuGlu || |||||||||||||||||||||||||||||| |||||||||||||||||||||||| euPheSerAlaPheHisIleCysLysPheLeuGlnGlyLysPheTyrGlnLeuSerLeuGlu TATTTTCAGCTTTCCACATCTGTAAGTTCCTCCAGGGCAAGTTCTATCAGCTGTCCCTCGAA ArgProValGluArgLeuLeuLeuThrSerLeuGlnSerThrMetCysSerAlaThrAlaGl |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| GlnProValGluArgValLeuLeuThrSerLeuGlnAsnThrMetCysSerAlaThrAlaGl CAGCCTGTGGAAAGGGTGCTCCTGACCTCCCTGCAGAACACGATGTGCTCAGCCACCGCAGG yAsnLeuArgLysLeuTyrThrLeuLeuSerAsnCysIleProProAlaLysLeuProGluL |||||||||||||||||||||||||||||||||||||||||||||| |||||| | yAsnLeuArgLysLeuTyrThrLeuLeuSerAsnCysIleProProThrGlnLeuProGlnL CAACCTGCGGAAGCTGTACACGCTCCTGAGCAACTGCATCCCCCCGACACAGCTGCCTCAAC euHisSerHisTrpLeuLeuAsnAspArgIleTrpLeuAlaHisArgTrpArgSerArgAla |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| euHisSerHisTrpLeuLeuAsnAspArgIleTrpLeuAlaHisArgTrpArgSerArgAla TCCATTCCCACTGGTTGCTCAACGACCGCATCTGGCTGGCGCACCGCTGGAGAAGCCGAGCT GluSerSerHisTyrPheGlnSerLeuGluValThrThrHisIleLeuSerGlnPhePheGl |||||| ||||||||| ||||||||||||||| |||||||||||||||||||| GluSerThrArgTyrPheGlnAsnLeuGluValThrThrArgIleLeuSerGlnPhePheGl GAGAGCACTCGCTATTTCCAGAACCTCGAGGTCACCACCCGCATCCTCAGCCAGTTCTTTGG yThrThrProSerGluLysGlnGlyMetAlaSerLeuPheArgTyrMetGlnGlnAsnSerA ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| yThrThrProSerGluLysGlnGlyValAlaSerLeuPheGlnTyrMetGlnGlnAsnSerG TACCACCCCATCTGAGAAACAAGGTGTGGCCTCTCTGTTCCAGTACATGCAACAGAACTCTG laAspLysAlaAsnPheAsnGlnGlyLeuCysAlaGlnAsnAsnHisAlaProSerAspThr ||||||||| |||||| |||||| |||||| ||| ||||||||| lyAspLysAlaSerPheAsnProGlyLeuSerHisGlnAsnAspHisAspProSerAspPro GAGACAAGGCAAGTTTCAACCCGGGCTTGAGTCACCAGAACGATCACGACCCCTCGGACCCC IleProGluSerProLysLeuGluGlnLeuValGluSerHisIleGlnHisSerLeuAsnAl |||||| |||||| ||||||||||||||| |||||||||||||||||||| SerProGluThrProLysValGluGlnLeuValGluAlaArgIleGlnHisSerLeuAsnAl AGTCCCGAAACCCCCAAAGTGGAGCAGTTGGTAGAAGCCCGTATCCAGCACTCCCTCAATGC aIleCysThrGlyProAlaAlaGlnLeuCysLeuGlyGluLeuAlaValValGlnLysSerT ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| aIleCysThrGlyProAlaAlaGlnLeuCysLeuGlyGluLeuAlaValValGlnLysSerM CATTTGCACAGGGCCGGCAGCCCAGCTCTGCCTCGGAGAGCTTGCAGTGGTCCAGAAATCCA hrHisLeuIleGlySerGlySerGluLysMetAsnIleGlnIleLeuGluAspThrHisLys |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| etHisLeuIleGlySerGlySerGluLysMetAsnIleGlnIleLeuGluAspThrHisLys TGCACCTCATTGGCTCCGGCTCAGAAAAGATGAACATCCAGATCCTGGAGGATACCCACAAA ValGlnProGlnProProAlaSerCysSerCysTyrPheAsnGlnAlaPheHisLeuProCy |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ValGlnProGlnSerProAlaSerCysSerCysTyrPheAsnGlnAlaPheHisLeuProCy GTGCAGCCCCAGTCCCCCGCCAGCTGCAGCTGCTACTTCAACCAGGCCTTCCACCTGCCCTG sArgHisIleLeuAlaMetLeuSerAlaArgArgGlnValLeuGlnProAspMetLeuProA ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| sArgHisIleLeuAlaMetLeuSerAlaArgHisGlnValLeuGlnProAspMetLeuProA CCGCCACATCCTAGCCATGCTCAGCGCCCGCCACCAGGTGCTCCAGCCCGACATGCTGCCAG laGlnTrpThrAlaGlyCysAlaThrSerLeuAspSerIleLeuGlySerLysTrpSerGlu ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| laGlnTrpThrAlaGlyCysAlaThrSerLeuAspGlyIleLeuGlySerLysTrpSerGlu CTCAATGGACAGCAGGCTGTGCCACCAGTCTAGATGGCATCCTGGGCAGCAAGTGGAGTGAG ThrLeuAspLysHisLeuAlaValThrHisLeuThrGluGluValGlyGlnLeuLeuGlnHi ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ThrLeuAspLysHisLeuAlaValThrLeuLeuThrGluLysValSerGlnLeuLeuGlnHi ACCCTGGATAAGCACCTGGCAGTGACTCTCCTTACTGAGAAGGTGAGTCAGCTTCTGCAGCA sCysThrLysGluGluPheGluArgArgTyrSerThrLeuArgGluLeuAlaAspSerTrpI |||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| sCysSerLysGluGluPheGluArgArgTyrSerIleLeuArgIleLeuAlaAspSerTrpI CTGCAGCAAGGAAGAGTTTGAGCGGAGGTATAGCATCCTGAGGATACTGGCTGACAGCTGGA leGlyProTyrGluGlnValGlnLeu |||||||||||||||||||||||||| leGlyProTyrGluGlnValGlnLeu TCGGCCCTTATGAGCAGGTCCAGCTC // |