| Basic information |
| Official Symbol | C20orf24 |
| Description | chromosome 20 open reading frame 24 |
| Other Aliases | PNAS-11, RIP5 |
| Other Description | rab5-interacting protein; uncharacterized protein C20orf24 |
| Mutation type | premature termination 128:R->TGA |
| Location | Scaffold000115_1:4037420 4054148 + |
| Wiki | Wikipedia GeneCard |
| Sequence |
| C20orf24 |
GGGCGGCGGAAGGAGGAGCCGCCTCAGCCGCAGTTGGCCAACGGGGCCCT CAAAGTCTCTGTCTGGAGCAAGGTGCTGCGGAGCGACGCTTCCTGGGAGG ACAAGGATGAATTTTTAGATGTGATCTACTGGTTCCGACAGATCATCGCT GTGGTCTTGGGTGTCATTTGGGGAGTTTTACCATTGCGAGGTTTCTTGGG AATAGCAGGGTCATCTGGATCATCTTCTACACTGCCATCCACTATGACTG ATGCTGTACTGCTCCCACCTGCTCCCTACCTAGTCCAAAGGATCCTCTTA ATTACAGCAAAGAAGTATGATTATTGGGGCGCCCCAGACACATGGAGCCT GGAAGACCCGTGTTTCCTGGACTGAGAATCAGTGTGTTGGGCGTCTGTGT TTTCTGCAAGGGTTGTGACC |
| Alignment |
| Align specie | Pep length | Pep align begin | Pep align end | Mutaion type and postion |
| Human | 143 | 4 | 143 | Premature termination 128:R->TGA |
Instructions:
*** -> premature termination codon; # -> frame shift
Alignment:
Human pep sequence --->
||||||||||||||||||||||
Treeshrew pep sequence --->
Treeshrew cds sequence --->
GlyArgArgLysGluGluProProGlnProGlnLeuAlaAsnGlyAlaLeuLysValSer
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GlyArgArgLysGluGluProProGlnProGlnLeuAlaAsnGlyAlaLeuLysValSer
GGGCGGCGGAAGGAGGAGCCGCCTCAGCCGCAGTTGGCCAACGGGGCCCTCAAAGTCTCT
ValTrpSerLysValLeuArgSerAspAlaAlaTrpGluAspLys >>>> Target I
|||||||||||||||||||||||||||||| |||||||||||| 1642
ValTrpSerLysValLeuArgSerAspAlaSerTrpGluAspLys++
GTCTGGAGCAAGGTGCTGCGGAGCGACGCTTCCTGGGAGGACAAGgt
ntron 1 >>>> AspGluPheLeuAspValIleTyrTrpPheArgGlnIleIleAlaV
bp ||||||||||||||||||||||||||||||||||||||||||||||
++AspGluPheLeuAspValIleTyrTrpPheArgGlnIleIleAlaV
agGATGAATTTTTAGATGTGATCTACTGGTTCCGACAGATCATCGCTG
alValLeuGlyValIleTrpGlyValLeuProLeuArgGlyPheLeuGlyIleAla{Gl}
||||||||||||||||||||||||||||||||||||||||||||||||||||||||{||}
alValLeuGlyValIleTrpGlyValLeuProLeuArgGlyPheLeuGlyIleAla{Gl}
TGGTCTTGGGTGTCATTTGGGGAGTTTTACCATTGCGAGGTTTCTTGGGAATAGCA{GG}
>>>> Target Intron 2 >>>> {y}SerPheGlySerSerPheThrLeuProS
14667 bp {|}||| ||||||||| ||||||||||
++ ++{y}SerSerGlySerSerSerThrLeuProS
gt ag{G}TCATCTGGATCATCTTCTACACTGCCAT
erIleMetThrAspGlyValGlnLeuProSerAlaProTyrProValGlnArgThrLeuL
|| ||||||||| ||| |||||| ||||||||| ||||||||| ||||
erThrMetThrAspAlaValLeuLeuProProAlaProTyrLeuValGlnArgIleLeuL
CCACTATGACTGATGCTGTACTGCTCCCACCTGCTCCCTACCTAGTCCAAAGGATCCTCT
euIleThrAlaGlnGluLeuAspArgTrpGlyThrProAlaProTrpAsnLeuGluAspP
||||||||||| ||| |||||| ||| ||| ||||||||||
euIleThrAlaLysLysTyrAspTyrTrpGlyAlaProAspThrTrpSerLeuGluAspP
TAATTACAGCAAAGAAGTATGATTATTGGGGCGCCCCAGACACATGGAGCCTGGAAGACC
roCysPheLeuAspArgGluSerValCysTrpAlaSerValPheSerAlaArgValValT
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
roCysPheLeuAsp***GluSerValCysTrpAlaSerValPheSerAlaArgValValT
CGTGTTTCCTGGACTGAGAATCAGTGTGTTGGGCGTCTGTGTTTTCTGCAAGGGTTGTGA
hr
||
hr
CC
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