| Basic information |
| Official Symbol | ACCN2 |
| Description | NA |
| Other Aliases | NA |
| Other Description | NA |
| Mutation type | Insert and frame-shift 439-440:P-V^T, Insert and frame-shift 465-466:G-P^ACTTC, premature termination 452:Y->TAA |
| Location | Scaffold145652_1:1707950 1680861 - |
| Wiki | Wikipedia GeneCard |
| Sequence |
| ACCN2 |
ATGGAACTGAAGGCCGAGGAGGAGGAGGTGGGTGGTGTCCAGCCTGTGAG CATCCAGGCCTTCGCCAGCAGCTCCACACTGCACGGCCTGGCACACATCT TCTCGTACGAGCGGCTGTCTCTGAAGCGGGCACTGTGGGCCCTGTGCTTC CTGGGCTCGCTGGCTGTGCTGCTGTGTGTGTGCACCGAGCGTGTGCAGTA CTACTTCAACTACCACCACGTCACCAAGCTCGACGAGGTAGCCGCATCCC AGCTCACCTTCCCTGCCATCACGCTGTGCAACCTCAACGAGTTCCGCTTC AGCCAAGTCTCCAAGAATGACCTGTACCATGCCGGGGAGCTGCTGGCNNN NGTGGGCTCCAGGTATGAGATACCGGATACACAGATGGCCGACGAAAAGC AGCTGGAGATATTGCAAGACAAAGCCAACTTCCGCAGCTTCAAGCCCAAG CCCTTCAACATGCGGGAGTTCTATGACCGAGCAGGGCACGACATTCGAGA CATGCTGCTCTCCTGCCACTTCCGGGGGGAGGTCTGCAGTGCAGAAGACT TCAAAGTGGTCTTCACTCGGTATGGAAAGTGCTACACATTCAACTCCGGC AGAGATGGGCGGCCACGGCTGAAGACCATGAAAGGTGGCACAGGCAACGG GCTGGAAATCATGCTGGACATCCAGCAGGACGAGTACCTGCCTGTGTGGG GGGAGACTGATGAGACGTCCTTCGAAGCGGGCATCAAAGTGCAGATCCAC AGCCAGGATGAGCCTCCTTTCATCGACCAGCTGGGCTTTGGCGTGGCCCC AGGCTTCCAGACCTTCGTGGCCTGCCAAGAGCAGCGGCTCATCTACCTGC CCCCGCCCTGGGGCACCTGCAAAGCTGTTACCCCGGACTCGGATTTCTTC GACTCCTACAGCATCACCGCCTGCCGCATAGACTGTGAGACGCGCTACCT AGTGGAGAACTGCAACTGCCGCATGGTGCACATGCCAGGGGATGCCCCAT ACTGCACCCCAGAGCAGTACAAGGAGTGTGCAGATCCTGCTCTGGACTTC TTGGTAGAGAAGGACCAGGAGTACTGCGTGTGTGAAATGCCCTGCAACCT GACCCGCTATGGCAAGGAGCTGTCCATGGTCAAGATCCCCAGCAAAGCCT CAGCCAAATACCTGGCTAAGAAGTTCAACAAGTCTGAGCAGTACATAGGG GAGAACATCCTGGTGCTGGACATTTTCTTTGAAGTCCTCAACTATGAGAC CATTGAGCAGAAGAAGGCTTATGAGATTGCAGGGCTCCTGGGTGAGCTGT TTAGGGCACATGTCCCCTTCCCATGTCATGGACATGGCATGGCTTCCTAA CTACCCAAAGCAGGATGCTCACCTCTTTCCTCTGAGGGTCCCCTCCCCCC CCAGAGGCCTTTCATCAAACCCTGTTGTCTTGGTGACATTGGGGGCCAGA TGGGGCTGTTCATCGGAGCCAGCATCCTCACGGTGCTGGAACTCTTTGAT TACGCCTACGAGGTCATTAAGCACAAGCTCTGCAGACGAGGGAAGTGCCA GAAGGAGGCCAAAAGGAGCAGCGCGGACAAGGGCGTCGCCCTTAGCCTGG ACGATGTCAAAAGACACAATCCGTGCGAGAGCCTTCGGGGCCATCCTGCC GGGATGACGTACGCCGCCAACATCCTACCTCACCATCCGGCCCGAGGCAC GTTTGAGGACTTTACCTGC |
| Alignment |
| Align specie | Pep length | Pep align begin | Pep align end | Mutaion type and postion |
| Human | 574 | 1 | 574 | Insert and frame-shift 439-440:P-V^T, Insert and frame-shift 465-466:G-P^ACTTC, Premature termination 452:Y->TAA |
Instructions:
*** -> premature termination codon; # -> frame shift
Alignment:
Human pep sequence --->
||||||||||||||||||||||
Treeshrew pep sequence --->
Treeshrew cds sequence --->
MetGluLeuLysAlaGluGluGluGluValGlyGlyValGlnProValSerIleGlnAla
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MetGluLeuLysAlaGluGluGluGluValGlyGlyValGlnProValSerIleGlnAla
ATGGAACTGAAGGCCGAGGAGGAGGAGGTGGGTGGTGTCCAGCCTGTGAGCATCCAGGCC
PheAlaSerSerSerThrLeuHisGlyLeuAlaHisIlePheSerTyrGluArgLeuSer
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PheAlaSerSerSerThrLeuHisGlyLeuAlaHisIlePheSerTyrGluArgLeuSer
TTCGCCAGCAGCTCCACACTGCACGGCCTGGCACACATCTTCTCGTACGAGCGGCTGTCT
LeuLysArgAlaLeuTrpAlaLeuCysPheLeuGlySerLeuAlaValLeuLeuCysVal
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
LeuLysArgAlaLeuTrpAlaLeuCysPheLeuGlySerLeuAlaValLeuLeuCysVal
CTGAAGCGGGCACTGTGGGCCCTGTGCTTCCTGGGCTCGCTGGCTGTGCTGCTGTGTGTG
CysThrGluArgValGlnTyrTyrPheHisTyrHisHisValThrLysLeuAspGluVal
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
CysThrGluArgValGlnTyrTyrPheAsnTyrHisHisValThrLysLeuAspGluVal
TGCACCGAGCGTGTGCAGTACTACTTCAACTACCACCACGTCACCAAGCTCGACGAGGTA
AlaAlaSerGlnLeuThrPheProAlaValThrLeuCysAsnLeuAsnGluPheArgPhe
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
AlaAlaSerGlnLeuThrPheProAlaIleThrLeuCysAsnLeuAsnGluPheArgPhe
GCCGCATCCCAGCTCACCTTCCCTGCCATCACGCTGTGCAACCTCAACGAGTTCCGCTTC
SerGlnValSerLysAsnAspLeuTyrHisAlaGlyGluLeuLeuAlaLeuLeu >>>>
||||||||||||||||||||||||||||||||||||||||||||||||
SerGlnValSerLysAsnAspLeuTyrHisAlaGlyGluLeuLeuAlaUnkVal+-
AGCCAAGTCTCCAAGAATGACCTGTACCATGCCGGGGAGCTGCTGGCNNNNGTGgg
Target Intron 1 >>>> AsnAsnArgTyrGluIleProAspThrGlnMetAlaA
594 bp |||||||||||||||||||||||||||||||
-+GlySerArgTyrGluIleProAspThrGlnMetAlaA
tgGGCTCCAGGTATGAGATACCGGATACACAGATGGCCG
spGluLysGlnLeuGluIleLeuGlnAspLysAlaAsnPheArgSerPheLysProLysP
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
spGluLysGlnLeuGluIleLeuGlnAspLysAlaAsnPheArgSerPheLysProLysP
ACGAAAAGCAGCTGGAGATATTGCAAGACAAAGCCAACTTCCGCAGCTTCAAGCCCAAGC
roPheAsnMetArgGluPheTyrAspArgAlaGlyHisAspIleArgAspMetLeuLeuS
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
roPheAsnMetArgGluPheTyrAspArgAlaGlyHisAspIleArgAspMetLeuLeuS
CCTTCAACATGCGGGAGTTCTATGACCGAGCAGGGCACGACATTCGAGACATGCTGCTCT
erCysHisPheArgGlyGluValCysSerAlaGluAspPheLysVal >>>> Target
||||||||||||||||||||||||||||||||||||||||||||||| 21
erCysHisPheArgGlyGluValCysSerAlaGluAspPheLysVal++
CCTGCCACTTCCGGGGGGAGGTCTGCAGTGCAGAAGACTTCAAAGTGgt
Intron 2 >>>> ValPheThrArgTyrGlyLysCysTyrThrPheAsnSerGlyAr
502 bp ||||||||||||||||||||||||||||||||||||||||||||
++ValPheThrArgTyrGlyLysCysTyrThrPheAsnSerGlyAr
agGTCTTCACTCGGTATGGAAAGTGCTACACATTCAACTCCGGCAG
gAspGlyArgProArgLeuLysThrMetLysGlyGlyThrGlyAsnGlyLeuGluIleMe
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
gAspGlyArgProArgLeuLysThrMetLysGlyGlyThrGlyAsnGlyLeuGluIleMe
AGATGGGCGGCCACGGCTGAAGACCATGAAAGGTGGCACAGGCAACGGGCTGGAAATCAT
tLeuAspIleGlnGlnAspGluTyrLeuProValTrpGlyGluThr{A} >>>> Targ
||||||||||||||||||||||||||||||||||||||||||||||{|}
tLeuAspIleGlnGlnAspGluTyrLeuProValTrpGlyGluThr{A}++
GCTGGACATCCAGCAGGACGAGTACCTGCCTGTGTGGGGGGAGACT{G}gt
et Intron 3 >>>> {sp}GluThrSerPheGluAlaGlyIleLysValGlnIleHi
609 bp {||}||||||||||||||||||||||||||||||||||||||
++{sp}GluThrSerPheGluAlaGlyIleLysValGlnIleHi
ag{AT}GAGACGTCCTTCGAAGCGGGCATCAAAGTGCAGATCCA
sSerGlnAspGluProProPheIleAspGlnLeuGlyPheGlyValAlaProGlyPheGl
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
sSerGlnAspGluProProPheIleAspGlnLeuGlyPheGlyValAlaProGlyPheGl
CAGCCAGGATGAGCCTCCTTTCATCGACCAGCTGGGCTTTGGCGTGGCCCCAGGCTTCCA
nThrPheValAlaCysGlnGluGlnArg >>>> Target Intron 4 >>>> Leu
|||||||||||||||||||||||||||| 290 bp |||
nThrPheValAlaCysGlnGluGlnArg++ ++Leu
GACCTTCGTGGCCTGCCAAGAGCAGCGGgt agCTC
IleTyrLeuProProProTrpGlyThrCysLysAlaValThrMetAspSerAspLeuAsp
|||||||||||||||||||||||||||||||||||||||||| |||||| |||
IleTyrLeuProProProTrpGlyThrCysLysAlaValThrProAspSer------Asp
ATCTACCTGCCCCCGCCCTGGGGCACCTGCAAAGCTGTTACCCCGGACTCG------GAT
PhePheAspSerTyrSerIleThrAlaCysArgIleAspCysGluThrArgTyrLeuVal
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PhePheAspSerTyrSerIleThrAlaCysArgIleAspCysGluThrArgTyrLeuVal
TTCTTCGACTCCTACAGCATCACCGCCTGCCGCATAGACTGTGAGACGCGCTACCTAGTG
GluAsnCysAsnCysArgMetValHisMetPro{G} >>>> Target Intron 5 >
|||||||||||||||||||||||||||||||||{|} 347 bp
GluAsnCysAsnCysArgMetValHisMetPro{G}++
GAGAACTGCAACTGCCGCATGGTGCACATGCCA{G}gt
>>> {ly}AspAlaProTyrCysThrProGluGlnTyrLysGluCysAlaAspProAla
{||}|||||||||||||||||||||||||||||||||||||||||||||||||||
++{ly}AspAlaProTyrCysThrProGluGlnTyrLysGluCysAlaAspProAla
ag{GG}GATGCCCCATACTGCACCCCAGAGCAGTACAAGGAGTGTGCAGATCCTGCT
Leu{A} >>>> Target Intron 6 >>>> {sp}PheLeuValGluLysAspGln
|||{|} 702 bp {||}|||||||||||||||||||||
Leu{A}++ ++{sp}PheLeuValGluLysAspGln
CTG{G}gt ag{AC}TTCTTGGTAGAGAAGGACCAG
GluTyrCysValCysGluMetProCysAsnLeuThrArgTyrGlyLysGluLeuSerMet
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GluTyrCysValCysGluMetProCysAsnLeuThrArgTyrGlyLysGluLeuSerMet
GAGTACTGCGTGTGTGAAATGCCCTGCAACCTGACCCGCTATGGCAAGGAGCTGTCCATG
ValLysIleProSerLysAlaSerAlaLysTyrLeuAlaLysLysPheAsnLysSerGlu
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ValLysIleProSerLysAlaSerAlaLysTyrLeuAlaLysLysPheAsnLysSerGlu
GTCAAGATCCCCAGCAAAGCCTCAGCCAAATACCTGGCTAAGAAGTTCAACAAGTCTGAG
GlnTyrIle{Gl} >>>> Target Intron 7 >>>> {y}GluAsnIleLeuVal
|||||||||{||} 486 bp {|}|||||||||||||||
GlnTyrIle{Gl}++ ++{y}GluAsnIleLeuVal
CAGTACATA{GG}gt ag{G}GAGAACATCCTGGTG
LeuAspIlePhePheGluValLeuAsnTyrGluThrIleGluGlnLysLysAlaTyrGlu
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
LeuAspIlePhePheGluValLeuAsnTyrGluThrIleGluGlnLysLysAlaTyrGlu
CTGGACATTTTCTTTGAAGTCCTCAACTATGAGACCATTGAGCAGAAGAAGGCTTATGAG
IleAlaGlyLeuLeuGlyGluLeuLeuMetThrPro-ValProPheSerCysHisGlyHi
|||||||||||||||||||||||| #||||||||| |||||||||||
IleAlaGlyLeuLeuGlyGluLeuPheArgAlaHis#ValProPheProCysHisGlyHi
ATTGCAGGGCTCCTGGGTGAGCTGTTTAGGGCACATTGTCCCCTTCCCATGTCATGGACA
sGlyValAlaProTyrHisProLysAlaGlyCysSerLeuLeuSerHisGluGly-----
|||| ||| |||||||||||||||||| |||||| ||||||#####
sGlyMetAlaSer***LeuProLysAlaGlyCysSerProLeuSerSerGluGly#####
TGGCATGGCTTCCTAACTACCCAAAGCAGGATGCTCACCTCTTTCCTCTGAGGGTACTTC
Pro<->ProProGlnArgProPheProLysProCysCysLeu{G} >>>> Target I
||| |||||||||||||||||| |||||||||||||||{|} 583
ProLeuProProGlnArgProPheIleLysProCysCysLeu{G}++
CCCCTCCCCCCCCAGAGGCCTTTCATCAAACCCTGTTGTCTT{G}gt
ntron 8 >>>> {ly}AspIleGlyGlyGlnMetGlyLeuPheIleGlyAlaSerIle
bp {||}||||||||||||||||||||||||||||||||||||||||||
++{ly}AspIleGlyGlyGlnMetGlyLeuPheIleGlyAlaSerIle
ag{GT}GACATTGGGGGCCAGATGGGGCTGTTCATCGGAGCCAGCATC
LeuThrValLeuGluLeuPheAspTyrAlaTyrGlu >>>> Target Intron 9 >
|||||||||||||||||||||||||||||||||||| 85 bp
LeuThrValLeuGluLeuPheAspTyrAlaTyrGlu++
CTCACGGTGCTGGAACTCTTTGATTACGCCTACGAGgt
>>> ValIleLysHisLysLeuCysArgArgGlyLysCysGlnLysGluAlaLysArgS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
++ValIleLysHisLysLeuCysArgArgGlyLysCysGlnLysGluAlaLysArgS
agGTCATTAAGCACAAGCTCTGCAGACGAGGGAAGTGCCAGAAGGAGGCCAAAAGGA
erSerAlaAspLysGlyValAlaLeuSerLeuAspAspValLysArgHis >>>> Tar
||||||||||||||||||||||||||||||||||||||||||||||||||
erSerAlaAspLysGlyValAlaLeuSerLeuAspAspValLysArgHis++
GCAGCGCGGACAAGGGCGTCGCCCTTAGCCTGGACGATGTCAAAAGACACgt
get Intron 10 >>>> AsnProCysGluSerLeuArgGlyHisProAlaGlyMetT
167 bp ||||||||||||||||||||||||||||||||||||||||
++AsnProCysGluSerLeuArgGlyHisProAlaGlyMetT
agAATCCGTGCGAGAGCCTTCGGGGCCATCCTGCCGGGATGA
hrTyrAlaAlaAsnIleLeuProHisHisProAlaArgGlyThrPheGluAspPheThrC
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
hrTyrAlaAlaAsnIleLeuProHisHisProAlaArgGlyThrPheGluAspPheThrC
CGTACGCCGCCAACATCCTACCTCACCATCCGGCCCGAGGCACGTTTGAGGACTTTACCT
ys
||
ys
GC
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